Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1017_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 34064465 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGG | 88416 | 0.25955493503273863 | No Hit |
ATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGA | 77980 | 0.22891890420119618 | No Hit |
GTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGG | 48105 | 0.14121754150549554 | No Hit |
TCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGTGG | 42846 | 0.12577916606058542 | No Hit |
CATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACG | 40530 | 0.1189802922194727 | No Hit |
ACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGGC | 39068 | 0.11468842971700863 | No Hit |
TGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGAT | 34659 | 0.10174532316887994 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCGGTA | 2610 | 0.0 | 55.180206 | 1 |
GTCGCAA | 2985 | 0.0 | 53.543533 | 1 |
GCGTACG | 2440 | 0.0 | 53.26622 | 1 |
GTTATCG | 6685 | 0.0 | 47.79538 | 3 |
ACCGTCC | 29495 | 0.0 | 46.672905 | 7 |
TTATCGG | 6800 | 0.0 | 46.64223 | 4 |
TCGGTAT | 3200 | 0.0 | 45.915245 | 2 |
CACCGTC | 30265 | 0.0 | 45.894436 | 6 |
CCCGGTA | 5810 | 0.0 | 45.31291 | 9 |
CGGAATT | 6780 | 0.0 | 45.12979 | 8 |
CCGTCCT | 30680 | 0.0 | 44.774837 | 8 |
TCGGAAT | 7025 | 0.0 | 44.05555 | 7 |
CGTCCTG | 31170 | 0.0 | 43.863922 | 9 |
CGTTATC | 6915 | 0.0 | 42.580326 | 2 |
CCACCGT | 33365 | 0.0 | 41.706146 | 5 |
TCGCAAG | 3940 | 0.0 | 39.52015 | 2 |
CGGACTA | 2475 | 0.0 | 39.26143 | 2 |
CGACCTG | 10490 | 0.0 | 38.59419 | 8 |
CAAGTAC | 59065 | 0.0 | 37.62822 | 4 |
TCGTTAT | 7595 | 0.0 | 37.616707 | 1 |