Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1015_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13216614 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGTGG | 21299 | 0.16115322729407092 | No Hit |
TACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGG | 20358 | 0.1540334006879523 | No Hit |
ATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGA | 19416 | 0.14690600784739571 | No Hit |
TGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGAT | 13709 | 0.10372550790996847 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTTATCG | 2425 | 0.0 | 47.781727 | 3 |
TTATCGG | 2595 | 0.0 | 44.65219 | 4 |
CGTTATC | 2460 | 0.0 | 44.49861 | 2 |
GCGTACG | 1325 | 0.0 | 43.74367 | 1 |
CGGAATT | 2625 | 0.0 | 43.014645 | 8 |
ACCGTCC | 11920 | 0.0 | 42.945744 | 7 |
CACCGTC | 12285 | 0.0 | 42.054264 | 6 |
TCGGAAT | 2705 | 0.0 | 41.74249 | 7 |
CCCGGTA | 2525 | 0.0 | 41.242527 | 9 |
CCGTCCT | 12665 | 0.0 | 40.604298 | 8 |
CGATTAC | 2240 | 0.0 | 40.221756 | 7 |
GTCGCAA | 1095 | 0.0 | 40.09988 | 1 |
CGTCCTG | 12775 | 0.0 | 39.97974 | 9 |
TCGTTAT | 2615 | 0.0 | 38.732037 | 1 |
CGACCTG | 4525 | 0.0 | 38.27026 | 8 |
TGTACGA | 910 | 0.0 | 37.953392 | 2 |
TTATCGA | 2420 | 0.0 | 37.723988 | 3 |
GTCGGTA | 1075 | 0.0 | 37.57825 | 1 |
GATAGTC | 12230 | 0.0 | 37.178883 | 5 |
CCGACTA | 1090 | 0.0 | 36.524 | 1 |