Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1002_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 31080150 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 526666 | 1.6945413712610782 | No Hit |
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 96346 | 0.3099920688928464 | No Hit |
GGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCT | 94365 | 0.3036182257807636 | No Hit |
GTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTGTCGATGA | 63215 | 0.20339348426568082 | No Hit |
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG | 53429 | 0.1719071497402683 | No Hit |
GGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGG | 43080 | 0.1386093696458994 | No Hit |
GGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACA | 42783 | 0.13765377580224034 | No Hit |
CAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGA | 39324 | 0.12652448588568588 | No Hit |
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC | 38747 | 0.12466799548908225 | No Hit |
CGATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCC | 35406 | 0.11391836911984014 | No Hit |
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 33484 | 0.10773435778141355 | No Hit |
GTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTG | 32615 | 0.1049383609795963 | No Hit |
CCGATTGGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGC | 32210 | 0.10363527846551576 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCTACG | 61685 | 0.0 | 107.99725 | 1 |
TCTACGG | 63740 | 0.0 | 104.35958 | 2 |
TACGGCC | 64390 | 0.0 | 103.14279 | 4 |
CTACGGC | 67395 | 0.0 | 98.786575 | 3 |
CGGCCAT | 68890 | 0.0 | 96.365074 | 6 |
ACGGCCA | 70145 | 0.0 | 94.68854 | 5 |
GGCCATA | 71075 | 0.0 | 93.442345 | 7 |
GCCATAC | 70640 | 0.0 | 93.2214 | 8 |
CCATACC | 72570 | 0.0 | 90.44437 | 9 |
CGACTCT | 21885 | 0.0 | 57.84255 | 1 |
TTAGCGG | 22970 | 0.0 | 53.071526 | 7 |
GCGCGGT | 13075 | 0.0 | 51.91237 | 6 |
CTTAGCG | 24415 | 0.0 | 50.00299 | 6 |
TAGCCCC | 15775 | 0.0 | 48.843914 | 2 |
GTAGCCC | 15815 | 0.0 | 48.646503 | 1 |
AACGCGC | 71075 | 0.0 | 46.321243 | 22-23 |
GAACGCG | 73845 | 0.0 | 45.90067 | 20-21 |
TAGCGGT | 26800 | 0.0 | 45.333244 | 8 |
CGTTCGA | 8480 | 0.0 | 45.18542 | 32-33 |
CATACCA | 73945 | 0.0 | 44.784245 | 10-11 |