Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1013_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 59012592 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGA | 168266 | 0.28513575543334885 | No Hit |
TACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGG | 166654 | 0.2824041350361292 | No Hit |
TGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGAT | 115600 | 0.1958903957311348 | No Hit |
CATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACG | 89506 | 0.1516727141895411 | No Hit |
GTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGG | 77140 | 0.1307178644178178 | No Hit |
GTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGA | 70293 | 0.11911525594401953 | No Hit |
ACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGGC | 68490 | 0.1160599758099085 | No Hit |
TCCTGCAATTCACATTAATTCTCGCAGCTAGCTGCGTTCTTCATCGACGC | 62227 | 0.10544698663634364 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGTACG | 3495 | 0.0 | 44.5564 | 1 |
CGATTAC | 10595 | 0.0 | 41.41322 | 7 |
TATCGAT | 11225 | 0.0 | 39.827423 | 4 |
TTATCGA | 11045 | 0.0 | 39.576035 | 3 |
CAAGTAC | 104110 | 0.0 | 38.765285 | 4 |
CGACCTG | 25380 | 0.0 | 38.10349 | 8 |
ACCGTCC | 25385 | 0.0 | 37.450264 | 7 |
GTTATCG | 6930 | 0.0 | 37.406574 | 3 |
GTCGCAA | 3630 | 0.0 | 37.09342 | 1 |
AGTACTA | 110240 | 0.0 | 36.497353 | 6 |
TCCGACC | 27990 | 0.0 | 35.6597 | 6 |
ATCGATT | 12660 | 0.0 | 35.45057 | 5 |
CCGACCT | 27420 | 0.0 | 35.438953 | 7 |
TTCCGAC | 28155 | 0.0 | 34.832134 | 5 |
TTTCCGA | 28315 | 0.0 | 34.3884 | 4 |
CCGTCCT | 28110 | 0.0 | 34.090748 | 8 |
CACCGTC | 28115 | 0.0 | 34.086105 | 6 |
GTACTAA | 117990 | 0.0 | 34.05862 | 7 |
TTATCGG | 7670 | 0.0 | 33.950005 | 4 |
CCCGGTA | 9425 | 0.0 | 33.829483 | 9 |