Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1019_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16902605 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGA | 54047 | 0.31975544598007233 | No Hit |
TACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGG | 49679 | 0.29391327549806673 | No Hit |
TCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGTGG | 34132 | 0.20193337062541544 | No Hit |
TCCTGCAATTCACATTAATTCTCGCAGCTAGCTGCGTTCTTCATCGACGC | 32601 | 0.19287559521150732 | No Hit |
CTGCAATTCACATTAATTCTCGCAGCTAGCTGCGTTCTTCATCGACGCAC | 30056 | 0.17781874450713367 | No Hit |
TGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGAT | 25606 | 0.15149144170380838 | No Hit |
CATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACG | 24101 | 0.14258748873324556 | No Hit |
GTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGG | 23641 | 0.13986601473559845 | No Hit |
ACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGGC | 21109 | 0.12488607525289741 | No Hit |
GCCGCAAGTGCGTTCGAAGTGTCGATGATCAATGTGTCCTGCAATTCACA | 20290 | 0.12004066828752136 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGTACGA | 1070 | 0.0 | 56.891163 | 2 |
GTTATCG | 3545 | 0.0 | 52.98624 | 3 |
CGGAATT | 3490 | 0.0 | 52.30096 | 8 |
GTCGGTA | 1105 | 0.0 | 51.92157 | 1 |
TTATCGG | 3690 | 0.0 | 50.428093 | 4 |
CCCGGTA | 4970 | 0.0 | 48.496853 | 9 |
TCGTTAT | 3335 | 0.0 | 48.274837 | 1 |
ACCGTCC | 18990 | 0.0 | 46.91944 | 7 |
CACCGTC | 19230 | 0.0 | 46.793392 | 6 |
CGTTATC | 3635 | 0.0 | 46.374935 | 2 |
CCGTCCT | 19525 | 0.0 | 45.753933 | 8 |
GCGTACG | 2415 | 0.0 | 45.332375 | 1 |
GATAGTC | 16395 | 0.0 | 44.863224 | 5 |
TATCGAT | 3590 | 0.0 | 44.660942 | 4 |
TCGGAAT | 4185 | 0.0 | 44.593662 | 7 |
TTATCGA | 3530 | 0.0 | 44.591484 | 3 |
CGTCCTG | 19920 | 0.0 | 44.522816 | 9 |
TCGGTAT | 1430 | 0.0 | 42.56891 | 2 |
CGATTAC | 3685 | 0.0 | 42.54761 | 7 |
CCACCGT | 21195 | 0.0 | 42.405716 | 5 |