Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1011_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 27988897 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGTGG | 112041 | 0.40030516386551424 | No Hit |
TGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGAT | 55707 | 0.19903249492111103 | No Hit |
TACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGG | 47832 | 0.17089633793000134 | No Hit |
ATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGA | 42388 | 0.1514457679414805 | No Hit |
TCCTGCAATTCACATTAATTCTCGCAGCTAGCTGCGTTCTTCATCGACGC | 36468 | 0.1302945235748304 | No Hit |
CTGCAATTCACATTAATTCTCGCAGCTAGCTGCGTTCTTCATCGACGCAC | 35834 | 0.1280293396342128 | No Hit |
GTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGA | 34858 | 0.1245422425899813 | No Hit |
ACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGG | 30844 | 0.1102008414265128 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTTATCG | 5120 | 0.0 | 57.946194 | 3 |
CGTTATC | 5065 | 0.0 | 52.122795 | 2 |
TTATCGG | 5780 | 0.0 | 51.632763 | 4 |
CGGAATT | 5725 | 0.0 | 51.197887 | 8 |
TCGGAAT | 5950 | 0.0 | 49.851265 | 7 |
GATAGTC | 40875 | 0.0 | 49.676304 | 5 |
CGACCTG | 10370 | 0.0 | 48.57516 | 8 |
TCGTTAT | 5175 | 0.0 | 46.270912 | 1 |
AGATAGT | 44875 | 0.0 | 45.52274 | 4 |
ATAGTCA | 45510 | 0.0 | 44.867 | 6 |
TTACCCG | 7460 | 0.0 | 44.86066 | 6 |
CTAGATA | 41325 | 0.0 | 44.76152 | 2 |
TAGATAG | 45140 | 0.0 | 44.491047 | 3 |
TTCCGAC | 11675 | 0.0 | 44.20682 | 5 |
TTTCCGA | 11715 | 0.0 | 43.85663 | 4 |
TACCCGC | 7690 | 0.0 | 43.06012 | 7 |
TGTACGA | 1685 | 0.0 | 42.730286 | 2 |
TAGTCAA | 47755 | 0.0 | 42.68197 | 7 |
CCCGGTA | 5025 | 0.0 | 42.61145 | 9 |
CCGACCT | 12015 | 0.0 | 42.4111 | 7 |