Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1021_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 28300555 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGG | 77191 | 0.2727543682447217 | No Hit |
ATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGA | 76122 | 0.2689770571637199 | No Hit |
GTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGG | 38732 | 0.13685950681885922 | No Hit |
CATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACG | 38333 | 0.13544964047524863 | No Hit |
TCCTGCAATTCACATTAATTCTCGCAGCTAGCTGCGTTCTTCATCGACGC | 34339 | 0.12133684304071068 | No Hit |
ACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGGC | 32026 | 0.11316385844729901 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACCGTCC | 16855 | 0.0 | 43.97824 | 7 |
CACCGTC | 17265 | 0.0 | 43.342804 | 6 |
GTCGCAA | 2335 | 0.0 | 42.121765 | 1 |
CCGTCCT | 17775 | 0.0 | 41.768208 | 8 |
CCCGGTA | 4800 | 0.0 | 41.074524 | 9 |
CGTCCTG | 17960 | 0.0 | 40.913548 | 9 |
CGACCTG | 9395 | 0.0 | 39.48083 | 8 |
CAAGTAC | 52680 | 0.0 | 39.4215 | 4 |
GTCGGTA | 1800 | 0.0 | 39.029495 | 1 |
GTTATCG | 4195 | 0.0 | 38.77762 | 3 |
TCCGACC | 9905 | 0.0 | 37.981274 | 6 |
AGTACTA | 55900 | 0.0 | 36.95719 | 6 |
CCGACCT | 10100 | 0.0 | 36.956367 | 7 |
CGTTATC | 4130 | 0.0 | 36.848766 | 2 |
CCACCGT | 20280 | 0.0 | 36.729816 | 5 |
GCGTACG | 2465 | 0.0 | 35.625298 | 1 |
TCGGTAT | 1975 | 0.0 | 35.267895 | 2 |
AAGTACT | 59005 | 0.0 | 35.135056 | 5 |
TTATCGG | 4640 | 0.0 | 34.932903 | 4 |
TTTCCGA | 10775 | 0.0 | 34.647854 | 4 |