Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1014_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 46909968 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGG | 115097 | 0.245357234095747 | No Hit |
ATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGA | 113589 | 0.24214256552040284 | No Hit |
TGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGAT | 78693 | 0.16775325875302238 | No Hit |
CATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACG | 60058 | 0.12802822632494654 | No Hit |
GTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGG | 54739 | 0.11668948484467097 | No Hit |
GTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGA | 47446 | 0.10114268251046345 | No Hit |
ACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGGC | 47024 | 0.10024308692770799 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTTATCG | 5530 | 0.0 | 39.99865 | 3 |
CGATTAC | 8210 | 0.0 | 39.47798 | 7 |
TTATCGA | 8320 | 0.0 | 39.10481 | 3 |
TATCGAT | 8545 | 0.0 | 38.349014 | 4 |
GCGTACG | 2795 | 0.0 | 38.331604 | 1 |
CAAGTAC | 72545 | 0.0 | 38.15328 | 4 |
CGACCTG | 19400 | 0.0 | 37.575768 | 8 |
GTCGCAA | 2900 | 0.0 | 35.934345 | 1 |
ACCGTCC | 18000 | 0.0 | 35.557655 | 7 |
AGTACTA | 77925 | 0.0 | 35.535725 | 6 |
TTATCGG | 6300 | 0.0 | 35.29566 | 4 |
TCCGACC | 21435 | 0.0 | 34.582676 | 6 |
CGTTATC | 6105 | 0.0 | 34.133453 | 2 |
TTCCGAC | 21595 | 0.0 | 34.060356 | 5 |
TTTCCGA | 21600 | 0.0 | 33.863705 | 4 |
CCGACCT | 21705 | 0.0 | 33.80073 | 7 |
GTACTAA | 82075 | 0.0 | 33.75184 | 7 |
ATCGATT | 10015 | 0.0 | 32.894592 | 5 |
AAGTACT | 85305 | 0.0 | 32.54834 | 5 |
TTTATCG | 10025 | 0.0 | 32.40593 | 2 |