Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1017_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 34064465 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 492827 | 1.4467480995224788 | No Hit |
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 65307 | 0.1917159127554183 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCTACG | 70400 | 0.0 | 112.47668 | 1 |
TCTACGG | 72950 | 0.0 | 108.14462 | 2 |
CTACGGC | 74610 | 0.0 | 105.53494 | 3 |
TACGGCC | 74485 | 0.0 | 104.56701 | 4 |
CGGCCAT | 75870 | 0.0 | 102.3523 | 6 |
ACGGCCA | 77375 | 0.0 | 100.449394 | 5 |
GCCATAC | 79630 | 0.0 | 96.885124 | 8 |
GGCCATA | 84235 | 0.0 | 92.575676 | 7 |
CCATACC | 84210 | 0.0 | 91.09552 | 9 |
TCACGAC | 6365 | 0.0 | 64.15262 | 4 |
TTCACGA | 6815 | 0.0 | 60.345154 | 3 |
GTTCACG | 6830 | 0.0 | 58.673096 | 2 |
CACGACG | 13700 | 0.0 | 57.05204 | 1 |
GTGCTCG | 4365 | 0.0 | 53.264084 | 1 |
CGCGTAT | 7035 | 0.0 | 53.177746 | 110-111 |
TATCGCG | 6820 | 0.0 | 53.14027 | 106-107 |
ACGCCGT | 8045 | 0.0 | 53.091507 | 110-111 |
TCGCGTA | 6880 | 0.0 | 52.80752 | 108-109 |
ATCGCGT | 7020 | 0.0 | 51.839714 | 108-109 |
TCGGACG | 9710 | 0.0 | 50.896446 | 106-107 |